STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH96059.1Phage portal protein. (450 aa)    
Predicted Functional Partners:
SHH96072.1
Hypothetical protein.
       0.545
SHH96018.1
Phage capsid family protein.
       0.497
SHH96033.1
Hypothetical protein.
       0.497
SHH95951.1
Hypothetical protein.
       0.490
SHH95965.1
Hypothetical protein.
       0.490
SHH95979.1
Hypothetical protein.
       0.490
SHH95992.1
Hypothetical protein.
       0.490
SHH96005.1
Hypothetical protein.
       0.490
SHH95937.1
Hypothetical protein.
       0.448
SHH96087.1
Hypothetical protein.
       0.410
Your Current Organism:
Chryseobacterium oranimense
NCBI taxonomy Id: 421058
Other names: C. oranimense, Chryseobacterium oranimense Hantsis-Zacharov et al. 2008, DSM 19055, LMG 24030, LMG:24030, strain H8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.