Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG34196.1 | SHG36897.1 | SAMN05421866_0108 | SAMN05421866_0201 | Putative auto-transporter adhesin, head GIN domain. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.767 |
SHG34196.1 | SHG42421.1 | SAMN05421866_0108 | SAMN05421866_0406 | Putative auto-transporter adhesin, head GIN domain. | TonB dependent receptor. | 0.749 |
SHG34196.1 | SHG63216.1 | SAMN05421866_0108 | SAMN05421866_1051 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.773 |
SHG34196.1 | SHG66116.1 | SAMN05421866_0108 | SAMN05421866_1146 | Putative auto-transporter adhesin, head GIN domain. | Ribonuclease inhibitor. | 0.671 |
SHG34196.1 | SHH07244.1 | SAMN05421866_0108 | SAMN05421866_2027 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.762 |
SHG34196.1 | SHH68283.1 | SAMN05421866_0108 | SAMN05421866_3461 | Putative auto-transporter adhesin, head GIN domain. | Hypothetical protein. | 0.773 |
SHG34196.1 | SHH86538.1 | SAMN05421866_0108 | SAMN05421866_4001 | Putative auto-transporter adhesin, head GIN domain. | Protein of unknown function. | 0.773 |
SHG34196.1 | SHH93715.1 | SAMN05421866_0108 | SAMN05421866_4311 | Putative auto-transporter adhesin, head GIN domain. | Tetratricopeptide repeat-containing protein. | 0.757 |
SHG36897.1 | SHG34196.1 | SAMN05421866_0201 | SAMN05421866_0108 | Activator of Hsp90 ATPase homolog 1-like protein. | Putative auto-transporter adhesin, head GIN domain. | 0.767 |
SHG36897.1 | SHG42421.1 | SAMN05421866_0201 | SAMN05421866_0406 | Activator of Hsp90 ATPase homolog 1-like protein. | TonB dependent receptor. | 0.762 |
SHG36897.1 | SHG63216.1 | SAMN05421866_0201 | SAMN05421866_1051 | Activator of Hsp90 ATPase homolog 1-like protein. | Hypothetical protein. | 0.770 |
SHG36897.1 | SHG66116.1 | SAMN05421866_0201 | SAMN05421866_1146 | Activator of Hsp90 ATPase homolog 1-like protein. | Ribonuclease inhibitor. | 0.701 |
SHG36897.1 | SHH07244.1 | SAMN05421866_0201 | SAMN05421866_2027 | Activator of Hsp90 ATPase homolog 1-like protein. | Hypothetical protein. | 0.751 |
SHG36897.1 | SHH68283.1 | SAMN05421866_0201 | SAMN05421866_3461 | Activator of Hsp90 ATPase homolog 1-like protein. | Hypothetical protein. | 0.770 |
SHG36897.1 | SHH86538.1 | SAMN05421866_0201 | SAMN05421866_4001 | Activator of Hsp90 ATPase homolog 1-like protein. | Protein of unknown function. | 0.774 |
SHG36897.1 | SHH93715.1 | SAMN05421866_0201 | SAMN05421866_4311 | Activator of Hsp90 ATPase homolog 1-like protein. | Tetratricopeptide repeat-containing protein. | 0.757 |
SHG42421.1 | SHG34196.1 | SAMN05421866_0406 | SAMN05421866_0108 | TonB dependent receptor. | Putative auto-transporter adhesin, head GIN domain. | 0.749 |
SHG42421.1 | SHG36897.1 | SAMN05421866_0406 | SAMN05421866_0201 | TonB dependent receptor. | Activator of Hsp90 ATPase homolog 1-like protein. | 0.762 |
SHG42421.1 | SHG63216.1 | SAMN05421866_0406 | SAMN05421866_1051 | TonB dependent receptor. | Hypothetical protein. | 0.751 |
SHG42421.1 | SHG66116.1 | SAMN05421866_0406 | SAMN05421866_1146 | TonB dependent receptor. | Ribonuclease inhibitor. | 0.741 |
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