STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG66116.1Ribonuclease inhibitor. (101 aa)    
Predicted Functional Partners:
SHG66048.1
Ribonuclease.
 
   0.982
SHG42421.1
TonB dependent receptor.
  
     0.741
SHH93715.1
Tetratricopeptide repeat-containing protein.
  
     0.714
SHG63216.1
Hypothetical protein.
  
     0.710
SHH86538.1
Protein of unknown function.
  
     0.706
SHH07244.1
Hypothetical protein.
  
     0.703
SHG36897.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.701
SHH68283.1
Hypothetical protein.
  
     0.689
SHH59885.1
Hypothetical protein.
  
     0.673
SHG34196.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.671
Your Current Organism:
Chryseobacterium oranimense
NCBI taxonomy Id: 421058
Other names: C. oranimense, Chryseobacterium oranimense Hantsis-Zacharov et al. 2008, DSM 19055, LMG 24030, LMG:24030, strain H8
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