STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG92410.1Outer membrane receptor proteins, mostly Fe transport. (743 aa)    
Predicted Functional Partners:
SHG49764.1
Hypothetical protein.
  
    0.734
SHG63971.1
Protein of unknown function.
  
     0.640
SHG92449.1
Outer membrane protein beta-barrel family protein.
 
    
0.639
SHH07854.1
Hypothetical protein.
  
     0.601
SHH11690.1
Uncharacterized iron-regulated membrane protein.
  
     0.565
SHG88909.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
   0.563
SHG92373.1
Integral membrane protein.
 
     0.556
SHH63258.1
Protein TonB.
  
   0.547
SHH76458.1
Outer membrane protein beta-barrel family protein.
  
 
  0.541
SHG35274.1
Hypothetical protein.
  
     0.540
Your Current Organism:
Chryseobacterium oranimense
NCBI taxonomy Id: 421058
Other names: C. oranimense, Chryseobacterium oranimense Hantsis-Zacharov et al. 2008, DSM 19055, LMG 24030, LMG:24030, strain H8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.