STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP61673.1Hyperosmotically inducible protein. (159 aa)    
Predicted Functional Partners:
SEP61649.1
SH3 domain-containing protein.
 
  
 0.963
SER11248.1
Hypothetical protein.
  
     0.757
SEQ59251.1
Ribonuclease inhibitor.
  
    0.751
SEQ97266.1
Hypothetical protein.
  
     0.750
SEP85732.1
Hypothetical protein.
  
     0.748
SEQ93485.1
Hypothetical protein.
  
     0.740
SEP62948.1
Tetratricopeptide repeat-containing protein.
  
     0.723
SEQ58075.1
Hypothetical protein.
  
     0.707
SER09791.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.691
SEQ28386.1
Hypothetical protein.
  
     0.667
Your Current Organism:
Chryseobacterium halperniae
NCBI taxonomy Id: 421072
Other names: C. halperniae, Chryseobacterium halperniae (Shaked et al. 2010) Hahnke et al. 2017, DSM 19921, Epilithonimonas lactis, Epilithonimonas lactis Shaked et al. 2010, Epilithonimonas sp. H1, LMG 24401, LMG:24401, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.