node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ26865.1 | nusA | SAMN04488097_1871 | SAMN04488097_1514 | RNA polymerase Rpb6. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.952 |
SEQ26865.1 | rplF | SAMN04488097_1871 | SAMN04488097_1257 | RNA polymerase Rpb6. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.960 |
SEQ26865.1 | rplK | SAMN04488097_1871 | SAMN04488097_0474 | RNA polymerase Rpb6. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.897 |
SEQ26865.1 | rpoA | SAMN04488097_1871 | SAMN04488097_1246 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
SEQ26865.1 | rpoB | SAMN04488097_1871 | SAMN04488097_0484 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
SEQ26865.1 | rpoC | SAMN04488097_1871 | SAMN04488097_0485 | RNA polymerase Rpb6. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
SEQ26865.1 | rpsC | SAMN04488097_1871 | SAMN04488097_1266 | RNA polymerase Rpb6. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.909 |
SEQ26865.1 | rpsD | SAMN04488097_1871 | SAMN04488097_1247 | RNA polymerase Rpb6. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.935 |
SEQ26865.1 | rpsE | SAMN04488097_1871 | SAMN04488097_1255 | RNA polymerase Rpb6. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.814 |
SEQ26865.1 | rpsG | SAMN04488097_1871 | SAMN04488097_1280 | RNA polymerase Rpb6. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.897 |
nusA | SEQ26865.1 | SAMN04488097_1514 | SAMN04488097_1871 | NusA antitermination factor; Participates in both transcription termination and antitermination. | RNA polymerase Rpb6. | 0.952 |
nusA | rplF | SAMN04488097_1514 | SAMN04488097_1257 | NusA antitermination factor; Participates in both transcription termination and antitermination. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.954 |
nusA | rplK | SAMN04488097_1514 | SAMN04488097_0474 | NusA antitermination factor; Participates in both transcription termination and antitermination. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.981 |
nusA | rpoA | SAMN04488097_1514 | SAMN04488097_1246 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
nusA | rpoB | SAMN04488097_1514 | SAMN04488097_0484 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
nusA | rpoC | SAMN04488097_1514 | SAMN04488097_0485 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.991 |
nusA | rpsC | SAMN04488097_1514 | SAMN04488097_1266 | NusA antitermination factor; Participates in both transcription termination and antitermination. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.966 |
nusA | rpsD | SAMN04488097_1514 | SAMN04488097_1247 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.958 |
nusA | rpsE | SAMN04488097_1514 | SAMN04488097_1255 | NusA antitermination factor; Participates in both transcription termination and antitermination. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.940 |
nusA | rpsG | SAMN04488097_1514 | SAMN04488097_1280 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.985 |