STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP75259.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
SEQ56429.1
Hypothetical protein.
  
     0.773
SEP69424.1
Branched-chain amino acid aminotransferase.
  
     0.765
SEP68928.1
Smr domain-containing protein.
  
     0.763
SEP66516.1
Hypothetical protein.
  
     0.758
SEQ82527.1
Mevalonate kinase.
  
     0.754
SEQ44258.1
pRiA4b ORF-3-like protein.
  
     0.753
SEP65342.1
Phage shock protein C (PspC) family protein.
  
     0.751
SEP70153.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.732
SEQ21667.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.719
SEQ15803.1
Putative porin.
  
     0.718
Your Current Organism:
Chryseobacterium halperniae
NCBI taxonomy Id: 421072
Other names: C. halperniae, Chryseobacterium halperniae (Shaked et al. 2010) Hahnke et al. 2017, DSM 19921, Epilithonimonas lactis, Epilithonimonas lactis Shaked et al. 2010, Epilithonimonas sp. H1, LMG 24401, LMG:24401, strain H1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.