Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP77762.1 | SEP77805.1 | SAMN04488097_0614 | SAMN04488097_0616 | Protein of unknown function. | Predicted thiol-disulfide oxidoreductase YuxK, DCC family. | 0.429 |
SEP77762.1 | SEP77837.1 | SAMN04488097_0614 | SAMN04488097_0617 | Protein of unknown function. | Haem-binding domain-containing protein. | 0.429 |
SEP77762.1 | murA | SAMN04488097_0614 | SAMN04488097_0613 | Protein of unknown function. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.890 |
SEP77805.1 | SEP77762.1 | SAMN04488097_0616 | SAMN04488097_0614 | Predicted thiol-disulfide oxidoreductase YuxK, DCC family. | Protein of unknown function. | 0.429 |
SEP77805.1 | SEP77837.1 | SAMN04488097_0616 | SAMN04488097_0617 | Predicted thiol-disulfide oxidoreductase YuxK, DCC family. | Haem-binding domain-containing protein. | 0.779 |
SEP77805.1 | murA | SAMN04488097_0616 | SAMN04488097_0613 | Predicted thiol-disulfide oxidoreductase YuxK, DCC family. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.444 |
SEP77837.1 | SEP77762.1 | SAMN04488097_0617 | SAMN04488097_0614 | Haem-binding domain-containing protein. | Protein of unknown function. | 0.429 |
SEP77837.1 | SEP77805.1 | SAMN04488097_0617 | SAMN04488097_0616 | Haem-binding domain-containing protein. | Predicted thiol-disulfide oxidoreductase YuxK, DCC family. | 0.779 |
SEP77837.1 | SEP78104.1 | SAMN04488097_0617 | SAMN04488097_0626 | Haem-binding domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.495 |
SEP77837.1 | SEP78136.1 | SAMN04488097_0617 | SAMN04488097_0627 | Haem-binding domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.495 |
SEP77837.1 | SEP87481.1 | SAMN04488097_0617 | SAMN04488097_0938 | Haem-binding domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.495 |
SEP77837.1 | SEP88913.1 | SAMN04488097_0617 | SAMN04488097_0989 | Haem-binding domain-containing protein. | Hypothetical protein. | 0.495 |
SEP77837.1 | SEQ59807.1 | SAMN04488097_0617 | SAMN04488097_2619 | Haem-binding domain-containing protein. | PDZ domain-containing protein. | 0.481 |
SEP77837.1 | SEQ83637.1 | SAMN04488097_0617 | SAMN04488097_3175 | Haem-binding domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.612 |
SEP77837.1 | SEQ95539.1 | SAMN04488097_0617 | SAMN04488097_3511 | Haem-binding domain-containing protein. | Component of the Tol biopolymer transport system. | 0.458 |
SEP77837.1 | murA | SAMN04488097_0617 | SAMN04488097_0613 | Haem-binding domain-containing protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.429 |
SEP78104.1 | SEP77837.1 | SAMN04488097_0626 | SAMN04488097_0617 | Por secretion system C-terminal sorting domain-containing protein. | Haem-binding domain-containing protein. | 0.495 |
SEP78104.1 | SEP78136.1 | SAMN04488097_0626 | SAMN04488097_0627 | Por secretion system C-terminal sorting domain-containing protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.585 |
SEP78104.1 | SEQ59807.1 | SAMN04488097_0626 | SAMN04488097_2619 | Por secretion system C-terminal sorting domain-containing protein. | PDZ domain-containing protein. | 0.499 |
SEP78104.1 | SEQ95539.1 | SAMN04488097_0626 | SAMN04488097_3511 | Por secretion system C-terminal sorting domain-containing protein. | Component of the Tol biopolymer transport system. | 0.457 |
page 1 of 3