STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP78631.1Hypothetical protein. (412 aa)    
Predicted Functional Partners:
SEP78530.1
Glycosyl transferase family 2.
       0.773
SEP78557.1
EpsG family protein.
       0.773
SEP78594.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SEP78496.1
Membrane protein involved in the export of O-antigen and teichoic acid.
       0.737
SEP78408.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.659
SEP78442.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.659
SEP78363.1
UDP-glucose 4-epimerase.
       0.648
SEP78475.1
Hypothetical protein.
       0.647
SEP78345.1
Capsular exopolysaccharide family.
     
 0.605
SEP78315.1
Capsular exopolysaccharide family.
     
 0.601
Your Current Organism:
Chryseobacterium halperniae
NCBI taxonomy Id: 421072
Other names: C. halperniae, Chryseobacterium halperniae (Shaked et al. 2010) Hahnke et al. 2017, DSM 19921, Epilithonimonas lactis, Epilithonimonas lactis Shaked et al. 2010, Epilithonimonas sp. H1, LMG 24401, LMG:24401, strain H1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.