Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP77762.1 | SEP86104.1 | SAMN04488097_0614 | SAMN04488097_0888 | Protein of unknown function. | Type I restriction enzyme R protein N terminus (HSDR_N). | 0.765 |
SEP77762.1 | SEQ03902.1 | SAMN04488097_0614 | SAMN04488097_1106 | Protein of unknown function. | Hypothetical protein. | 0.643 |
SEP77762.1 | SEQ06485.1 | SAMN04488097_0614 | SAMN04488097_1199 | Protein of unknown function. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.647 |
SEP77762.1 | SEQ19208.1 | SAMN04488097_0614 | SAMN04488097_1615 | Protein of unknown function. | uroporphyrinogen-III synthase. | 0.772 |
SEP77762.1 | SEQ26865.1 | SAMN04488097_0614 | SAMN04488097_1871 | Protein of unknown function. | RNA polymerase Rpb6. | 0.751 |
SEP77762.1 | rpsU | SAMN04488097_0614 | SAMN04488097_0458 | Protein of unknown function. | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.750 |
SEP86104.1 | SEP77762.1 | SAMN04488097_0888 | SAMN04488097_0614 | Type I restriction enzyme R protein N terminus (HSDR_N). | Protein of unknown function. | 0.765 |
SEP86104.1 | SEQ03902.1 | SAMN04488097_0888 | SAMN04488097_1106 | Type I restriction enzyme R protein N terminus (HSDR_N). | Hypothetical protein. | 0.431 |
SEP86104.1 | SEQ06485.1 | SAMN04488097_0888 | SAMN04488097_1199 | Type I restriction enzyme R protein N terminus (HSDR_N). | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.660 |
SEP86104.1 | SEQ19208.1 | SAMN04488097_0888 | SAMN04488097_1615 | Type I restriction enzyme R protein N terminus (HSDR_N). | uroporphyrinogen-III synthase. | 0.750 |
SEP86104.1 | SEQ26865.1 | SAMN04488097_0888 | SAMN04488097_1871 | Type I restriction enzyme R protein N terminus (HSDR_N). | RNA polymerase Rpb6. | 0.773 |
SEP86104.1 | rpsU | SAMN04488097_0888 | SAMN04488097_0458 | Type I restriction enzyme R protein N terminus (HSDR_N). | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.741 |
SEQ03902.1 | SEP77762.1 | SAMN04488097_1106 | SAMN04488097_0614 | Hypothetical protein. | Protein of unknown function. | 0.643 |
SEQ03902.1 | SEP86104.1 | SAMN04488097_1106 | SAMN04488097_0888 | Hypothetical protein. | Type I restriction enzyme R protein N terminus (HSDR_N). | 0.431 |
SEQ03902.1 | SEQ06485.1 | SAMN04488097_1106 | SAMN04488097_1199 | Hypothetical protein. | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | 0.591 |
SEQ03902.1 | SEQ19208.1 | SAMN04488097_1106 | SAMN04488097_1615 | Hypothetical protein. | uroporphyrinogen-III synthase. | 0.569 |
SEQ03902.1 | rpsU | SAMN04488097_1106 | SAMN04488097_0458 | Hypothetical protein. | SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family. | 0.505 |
SEQ06485.1 | SEP77762.1 | SAMN04488097_1199 | SAMN04488097_0614 | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | Protein of unknown function. | 0.647 |
SEQ06485.1 | SEP86104.1 | SAMN04488097_1199 | SAMN04488097_0888 | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | Type I restriction enzyme R protein N terminus (HSDR_N). | 0.660 |
SEQ06485.1 | SEQ03902.1 | SAMN04488097_1199 | SAMN04488097_1106 | Regulatory protein; Modulates RecA activity; Belongs to the RecX family. | Hypothetical protein. | 0.591 |
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