Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP59515.1 | SEQ08695.1 | SAMN04488097_0017 | SAMN04488097_1275 | Hypothetical protein. | Hypothetical protein. | 0.717 |
SEP59515.1 | SEQ09897.1 | SAMN04488097_0017 | SAMN04488097_1312 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.642 |
SEP59515.1 | SEQ09921.1 | SAMN04488097_0017 | SAMN04488097_1313 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.625 |
SEP61673.1 | SEP62859.1 | SAMN04488097_0091 | SAMN04488097_0136 | Hyperosmotically inducible protein. | Protein TonB. | 0.590 |
SEP61673.1 | SEQ03723.1 | SAMN04488097_0091 | SAMN04488097_1100 | Hyperosmotically inducible protein. | VanZ like family protein. | 0.657 |
SEP61673.1 | SEQ09921.1 | SAMN04488097_0091 | SAMN04488097_1313 | Hyperosmotically inducible protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.615 |
SEP61673.1 | SEQ93485.1 | SAMN04488097_0091 | SAMN04488097_3430 | Hyperosmotically inducible protein. | Hypothetical protein. | 0.740 |
SEP61673.1 | SEQ97266.1 | SAMN04488097_0091 | SAMN04488097_3577 | Hyperosmotically inducible protein. | Hypothetical protein. | 0.750 |
SEP62859.1 | SEP61673.1 | SAMN04488097_0136 | SAMN04488097_0091 | Protein TonB. | Hyperosmotically inducible protein. | 0.590 |
SEP62859.1 | SEQ03723.1 | SAMN04488097_0136 | SAMN04488097_1100 | Protein TonB. | VanZ like family protein. | 0.490 |
SEP62859.1 | SEQ09897.1 | SAMN04488097_0136 | SAMN04488097_1312 | Protein TonB. | Outer membrane receptor proteins, mostly Fe transport. | 0.504 |
SEP62859.1 | SEQ09921.1 | SAMN04488097_0136 | SAMN04488097_1313 | Protein TonB. | Outer membrane receptor proteins, mostly Fe transport. | 0.616 |
SEP62859.1 | SEQ93485.1 | SAMN04488097_0136 | SAMN04488097_3430 | Protein TonB. | Hypothetical protein. | 0.816 |
SEP62859.1 | SEQ97266.1 | SAMN04488097_0136 | SAMN04488097_3577 | Protein TonB. | Hypothetical protein. | 0.715 |
SEQ03723.1 | SEP61673.1 | SAMN04488097_1100 | SAMN04488097_0091 | VanZ like family protein. | Hyperosmotically inducible protein. | 0.657 |
SEQ03723.1 | SEP62859.1 | SAMN04488097_1100 | SAMN04488097_0136 | VanZ like family protein. | Protein TonB. | 0.490 |
SEQ03723.1 | SEQ09921.1 | SAMN04488097_1100 | SAMN04488097_1313 | VanZ like family protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.726 |
SEQ03723.1 | SEQ22225.1 | SAMN04488097_1100 | SAMN04488097_1722 | VanZ like family protein. | Protein of unknown function. | 0.499 |
SEQ03723.1 | SEQ93485.1 | SAMN04488097_1100 | SAMN04488097_3430 | VanZ like family protein. | Hypothetical protein. | 0.617 |
SEQ03723.1 | SEQ97266.1 | SAMN04488097_1100 | SAMN04488097_3577 | VanZ like family protein. | Hypothetical protein. | 0.700 |
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