STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ12601.1Dehydrogenase (flavoprotein). (415 aa)    
Predicted Functional Partners:
SEP85125.1
Electron transfer flavoprotein beta subunit.
  
 
 0.894
SEQ12425.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.848
SEP85153.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.836
SEQ12392.1
All-trans-retinol 13,14-reductase.
 
 
 0.835
SEQ12465.1
Acyl carrier protein.
 
  
  0.822
SEQ12353.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.813
SEQ11569.1
Hypothetical protein.
 
     0.809
SEQ11990.1
Hypothetical protein.
 
   
 0.787
SEQ12023.1
Acyl carrier protein.
 
  
  0.786
SEQ12201.1
Outer membrane lipoprotein carrier protein.
 
   
 0.783
Your Current Organism:
Chryseobacterium halperniae
NCBI taxonomy Id: 421072
Other names: C. halperniae, Chryseobacterium halperniae (Shaked et al. 2010) Hahnke et al. 2017, DSM 19921, Epilithonimonas lactis, Epilithonimonas lactis Shaked et al. 2010, Epilithonimonas sp. H1, LMG 24401, LMG:24401, strain H1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.