STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ27689.1Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. (1016 aa)    
Predicted Functional Partners:
SEQ27735.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 0.999
SEQ27775.1
Quinol:cytochrome c oxidoreductase membrane protein.
 
 0.999
SEQ27813.1
Cytochrome c, mono-and diheme variants.
 
 0.999
SEQ27853.1
Hypothetical protein.
 
 
 
 0.999
SEQ27655.1
Cytochrome c553.
 
 
 0.998
SEQ10214.1
Cytochrome c oxidase cbb3-type subunit 3.
 
 0.897
SEQ11544.1
Conserved hypothetical protein, HNE_0200 family.
  
 0.859
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.834
SEQ79049.1
Hypothetical protein.
   
 
 0.834
SEQ03873.1
Allosteric NADP-dependent malic enzyme.
    
 0.720
Your Current Organism:
Chryseobacterium halperniae
NCBI taxonomy Id: 421072
Other names: C. halperniae, Chryseobacterium halperniae (Shaked et al. 2010) Hahnke et al. 2017, DSM 19921, Epilithonimonas lactis, Epilithonimonas lactis Shaked et al. 2010, Epilithonimonas sp. H1, LMG 24401, LMG:24401, strain H1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.