Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP90690.1 | SEQ27881.1 | SAMN04488097_1049 | SAMN04488097_1900 | Protein involved in gliding motility GldD. | Hypothetical protein. | 0.590 |
SEP90690.1 | SEQ56546.1 | SAMN04488097_1049 | SAMN04488097_2500 | Protein involved in gliding motility GldD. | Gliding motility-associated lipoprotein GldJ. | 0.879 |
SEP90690.1 | SEQ59087.1 | SAMN04488097_1049 | SAMN04488097_2590 | Protein involved in gliding motility GldD. | Protein involved in gliding motility GldG. | 0.868 |
SEQ27655.1 | SEQ27689.1 | SAMN04488097_1894 | SAMN04488097_1895 | Cytochrome c553. | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | 0.998 |
SEQ27655.1 | SEQ27735.1 | SAMN04488097_1894 | SAMN04488097_1896 | Cytochrome c553. | Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. | 0.997 |
SEQ27655.1 | SEQ27775.1 | SAMN04488097_1894 | SAMN04488097_1897 | Cytochrome c553. | Quinol:cytochrome c oxidoreductase membrane protein. | 0.991 |
SEQ27655.1 | SEQ27813.1 | SAMN04488097_1894 | SAMN04488097_1898 | Cytochrome c553. | Cytochrome c, mono-and diheme variants. | 0.991 |
SEQ27655.1 | SEQ27853.1 | SAMN04488097_1894 | SAMN04488097_1899 | Cytochrome c553. | Hypothetical protein. | 0.988 |
SEQ27655.1 | SEQ27881.1 | SAMN04488097_1894 | SAMN04488097_1900 | Cytochrome c553. | Hypothetical protein. | 0.498 |
SEQ27655.1 | SEQ27921.1 | SAMN04488097_1894 | SAMN04488097_1901 | Cytochrome c553. | FeS assembly SUF system protein. | 0.498 |
SEQ27689.1 | SEQ27655.1 | SAMN04488097_1895 | SAMN04488097_1894 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Cytochrome c553. | 0.998 |
SEQ27689.1 | SEQ27735.1 | SAMN04488097_1895 | SAMN04488097_1896 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. | 0.999 |
SEQ27689.1 | SEQ27775.1 | SAMN04488097_1895 | SAMN04488097_1897 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Quinol:cytochrome c oxidoreductase membrane protein. | 0.999 |
SEQ27689.1 | SEQ27813.1 | SAMN04488097_1895 | SAMN04488097_1898 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Cytochrome c, mono-and diheme variants. | 0.999 |
SEQ27689.1 | SEQ27853.1 | SAMN04488097_1895 | SAMN04488097_1899 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Hypothetical protein. | 0.999 |
SEQ27689.1 | SEQ27881.1 | SAMN04488097_1895 | SAMN04488097_1900 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | Hypothetical protein. | 0.541 |
SEQ27689.1 | SEQ27921.1 | SAMN04488097_1895 | SAMN04488097_1901 | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | FeS assembly SUF system protein. | 0.669 |
SEQ27735.1 | SEQ27655.1 | SAMN04488097_1896 | SAMN04488097_1894 | Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. | Cytochrome c553. | 0.997 |
SEQ27735.1 | SEQ27689.1 | SAMN04488097_1896 | SAMN04488097_1895 | Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. | Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. | 0.999 |
SEQ27735.1 | SEQ27775.1 | SAMN04488097_1896 | SAMN04488097_1897 | Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. | Quinol:cytochrome c oxidoreductase membrane protein. | 0.999 |
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