Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP62572.1 | SEQ46855.1 | SAMN04488097_0125 | SAMN04488097_2152 | Cell division transport system ATP-binding protein. | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.980 |
SEP67009.1 | SEQ46855.1 | SAMN04488097_0265 | SAMN04488097_2152 | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.911 |
SEQ46702.1 | SEQ46768.1 | SAMN04488097_2147 | SAMN04488097_2149 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.768 |
SEQ46702.1 | SEQ46825.1 | SAMN04488097_2147 | SAMN04488097_2151 | Hypothetical protein. | Protein of unknown function. | 0.538 |
SEQ46702.1 | SEQ46855.1 | SAMN04488097_2147 | SAMN04488097_2152 | Hypothetical protein. | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.538 |
SEQ46702.1 | truB | SAMN04488097_2147 | SAMN04488097_2148 | Hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.780 |
SEQ46702.1 | uppP | SAMN04488097_2147 | SAMN04488097_2150 | Hypothetical protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.745 |
SEQ46768.1 | SEQ46702.1 | SAMN04488097_2149 | SAMN04488097_2147 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.768 |
SEQ46768.1 | SEQ46825.1 | SAMN04488097_2149 | SAMN04488097_2151 | Por secretion system C-terminal sorting domain-containing protein. | Protein of unknown function. | 0.542 |
SEQ46768.1 | SEQ46855.1 | SAMN04488097_2149 | SAMN04488097_2152 | Por secretion system C-terminal sorting domain-containing protein. | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.542 |
SEQ46768.1 | truB | SAMN04488097_2149 | SAMN04488097_2148 | Por secretion system C-terminal sorting domain-containing protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.773 |
SEQ46768.1 | uppP | SAMN04488097_2149 | SAMN04488097_2150 | Por secretion system C-terminal sorting domain-containing protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.746 |
SEQ46825.1 | SEQ46702.1 | SAMN04488097_2151 | SAMN04488097_2147 | Protein of unknown function. | Hypothetical protein. | 0.538 |
SEQ46825.1 | SEQ46768.1 | SAMN04488097_2151 | SAMN04488097_2149 | Protein of unknown function. | Por secretion system C-terminal sorting domain-containing protein. | 0.542 |
SEQ46825.1 | SEQ46855.1 | SAMN04488097_2151 | SAMN04488097_2152 | Protein of unknown function. | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.862 |
SEQ46825.1 | SEQ46884.1 | SAMN04488097_2151 | SAMN04488097_2153 | Protein of unknown function. | DNA topoisomerase-1. | 0.517 |
SEQ46825.1 | truB | SAMN04488097_2151 | SAMN04488097_2148 | Protein of unknown function. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.670 |
SEQ46825.1 | uppP | SAMN04488097_2151 | SAMN04488097_2150 | Protein of unknown function. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.682 |
SEQ46855.1 | SEP62572.1 | SAMN04488097_2152 | SAMN04488097_0125 | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Cell division transport system ATP-binding protein. | 0.980 |
SEQ46855.1 | SEP67009.1 | SAMN04488097_2152 | SAMN04488097_0265 | Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. | 0.911 |
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