Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ20139.1 | SEQ70739.1 | SAMN04488097_1646 | SAMN04488097_2934 | phospholipid/cholesterol/gamma-HCH transport system permease protein. | Protease-4. | 0.428 |
SEQ70634.1 | SEQ70657.1 | SAMN04488097_2930 | SAMN04488097_2931 | ATP-dependent DNA helicase RecQ. | OmpA-OmpF porin, OOP family. | 0.553 |
SEQ70634.1 | SEQ70691.1 | SAMN04488097_2930 | SAMN04488097_2932 | ATP-dependent DNA helicase RecQ. | OmpA-OmpF porin, OOP family. | 0.506 |
SEQ70634.1 | SEQ70720.1 | SAMN04488097_2930 | SAMN04488097_2933 | ATP-dependent DNA helicase RecQ. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.505 |
SEQ70634.1 | SEQ70739.1 | SAMN04488097_2930 | SAMN04488097_2934 | ATP-dependent DNA helicase RecQ. | Protease-4. | 0.465 |
SEQ70657.1 | SEQ70634.1 | SAMN04488097_2931 | SAMN04488097_2930 | OmpA-OmpF porin, OOP family. | ATP-dependent DNA helicase RecQ. | 0.553 |
SEQ70657.1 | SEQ70691.1 | SAMN04488097_2931 | SAMN04488097_2932 | OmpA-OmpF porin, OOP family. | OmpA-OmpF porin, OOP family. | 0.717 |
SEQ70657.1 | SEQ70720.1 | SAMN04488097_2931 | SAMN04488097_2933 | OmpA-OmpF porin, OOP family. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.690 |
SEQ70657.1 | SEQ70739.1 | SAMN04488097_2931 | SAMN04488097_2934 | OmpA-OmpF porin, OOP family. | Protease-4. | 0.505 |
SEQ70691.1 | SEQ70634.1 | SAMN04488097_2932 | SAMN04488097_2930 | OmpA-OmpF porin, OOP family. | ATP-dependent DNA helicase RecQ. | 0.506 |
SEQ70691.1 | SEQ70657.1 | SAMN04488097_2932 | SAMN04488097_2931 | OmpA-OmpF porin, OOP family. | OmpA-OmpF porin, OOP family. | 0.717 |
SEQ70691.1 | SEQ70720.1 | SAMN04488097_2932 | SAMN04488097_2933 | OmpA-OmpF porin, OOP family. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.758 |
SEQ70691.1 | SEQ70739.1 | SAMN04488097_2932 | SAMN04488097_2934 | OmpA-OmpF porin, OOP family. | Protease-4. | 0.604 |
SEQ70720.1 | SEQ70634.1 | SAMN04488097_2933 | SAMN04488097_2930 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | ATP-dependent DNA helicase RecQ. | 0.505 |
SEQ70720.1 | SEQ70657.1 | SAMN04488097_2933 | SAMN04488097_2931 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | OmpA-OmpF porin, OOP family. | 0.690 |
SEQ70720.1 | SEQ70691.1 | SAMN04488097_2933 | SAMN04488097_2932 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | OmpA-OmpF porin, OOP family. | 0.758 |
SEQ70720.1 | SEQ70739.1 | SAMN04488097_2933 | SAMN04488097_2934 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | Protease-4. | 0.605 |
SEQ70739.1 | SEQ20139.1 | SAMN04488097_2934 | SAMN04488097_1646 | Protease-4. | phospholipid/cholesterol/gamma-HCH transport system permease protein. | 0.428 |
SEQ70739.1 | SEQ70634.1 | SAMN04488097_2934 | SAMN04488097_2930 | Protease-4. | ATP-dependent DNA helicase RecQ. | 0.465 |
SEQ70739.1 | SEQ70657.1 | SAMN04488097_2934 | SAMN04488097_2931 | Protease-4. | OmpA-OmpF porin, OOP family. | 0.505 |
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