STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ79318.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
SEQ79371.1
Hypothetical protein.
 
     0.784
SEQ79345.1
Stress responsive A/B Barrel Domain.
 
     0.763
SER02756.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.694
SEQ09062.1
Hypothetical protein.
  
     0.652
SER12697.1
Delta-60 repeat domain-containing protein/Por secretion system C-terminal sorting domain-containing protein.
  
     0.622
SEP67659.1
Hypothetical protein.
  
     0.558
SEQ79416.1
Signal transduction histidine kinase.
 
     0.550
SEP71286.1
Transcriptional regulator, AraC family.
  
   0.511
SEQ92606.1
Hypothetical protein.
  
     0.511
SER12152.1
FAD-NAD(P)-binding.
  
     0.461
Your Current Organism:
Chryseobacterium halperniae
NCBI taxonomy Id: 421072
Other names: C. halperniae, Chryseobacterium halperniae (Shaked et al. 2010) Hahnke et al. 2017, DSM 19921, Epilithonimonas lactis, Epilithonimonas lactis Shaked et al. 2010, Epilithonimonas sp. H1, LMG 24401, LMG:24401, strain H1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.