Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP88116.1 | SEP88139.1 | SAMN04488097_0961 | SAMN04488097_0962 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.909 |
SEP88116.1 | SEQ64428.1 | SAMN04488097_0961 | SAMN04488097_2749 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.786 |
SEP88116.1 | SEQ82102.1 | SAMN04488097_0961 | SAMN04488097_3124 | Hypothetical protein. | Plasmid stabilization system protein ParE. | 0.529 |
SEP88139.1 | SEP88116.1 | SAMN04488097_0962 | SAMN04488097_0961 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.909 |
SEP88139.1 | SEQ64392.1 | SAMN04488097_0962 | SAMN04488097_2748 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.786 |
SEP88139.1 | SEQ82102.1 | SAMN04488097_0962 | SAMN04488097_3124 | Helix-turn-helix domain-containing protein. | Plasmid stabilization system protein ParE. | 0.478 |
SEQ06979.1 | SEQ67076.1 | SAMN04488097_1220 | SAMN04488097_2825 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.442 |
SEQ06979.1 | SEQ82102.1 | SAMN04488097_1220 | SAMN04488097_3124 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Plasmid stabilization system protein ParE. | 0.425 |
SEQ51432.1 | SEQ82102.1 | SAMN04488097_2320 | SAMN04488097_3124 | Addiction module toxin, RelE/StbE family. | Plasmid stabilization system protein ParE. | 0.413 |
SEQ64392.1 | SEP88139.1 | SAMN04488097_2748 | SAMN04488097_0962 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.786 |
SEQ64392.1 | SEQ64428.1 | SAMN04488097_2748 | SAMN04488097_2749 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.941 |
SEQ64392.1 | SEQ82102.1 | SAMN04488097_2748 | SAMN04488097_3124 | Hypothetical protein. | Plasmid stabilization system protein ParE. | 0.551 |
SEQ64428.1 | SEP88116.1 | SAMN04488097_2749 | SAMN04488097_0961 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.786 |
SEQ64428.1 | SEQ64392.1 | SAMN04488097_2749 | SAMN04488097_2748 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.941 |
SEQ64428.1 | SEQ82102.1 | SAMN04488097_2749 | SAMN04488097_3124 | Helix-turn-helix domain-containing protein. | Plasmid stabilization system protein ParE. | 0.513 |
SEQ67076.1 | SEQ06979.1 | SAMN04488097_2825 | SAMN04488097_1220 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.442 |
SEQ67076.1 | SEQ82102.1 | SAMN04488097_2825 | SAMN04488097_3124 | Hypothetical protein. | Plasmid stabilization system protein ParE. | 0.404 |
SEQ82102.1 | SEP88116.1 | SAMN04488097_3124 | SAMN04488097_0961 | Plasmid stabilization system protein ParE. | Hypothetical protein. | 0.529 |
SEQ82102.1 | SEP88139.1 | SAMN04488097_3124 | SAMN04488097_0962 | Plasmid stabilization system protein ParE. | Helix-turn-helix domain-containing protein. | 0.478 |
SEQ82102.1 | SEQ06979.1 | SAMN04488097_3124 | SAMN04488097_1220 | Plasmid stabilization system protein ParE. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.425 |
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