Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
IX38_00935Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (672 aa)    
Predicted Functional Partners:
IX38_00930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
IX38_00940
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.771
IX38_00925
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
IX38_00945
DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
IX38_00950
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
IX38_00955
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.418
hflX
GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.418
IX38_00915
Ionic transporter y4hA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
Your Current Organism:
Chryseobacterium luteum
NCBI taxonomy Id: 421531
Other names: C. luteum, Chryseobacterium luteum Behrendt et al. 2007 emend. Hahnke et al. 2016, Chryseobacterium luteum Behrendt et al. 2007 emend. Montero-Calasanz et al. 2014, DSM 18605, LMG 23785, LMG:23785, strain P 456/04
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