STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX38_03420B-glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)    
Predicted Functional Partners:
IX38_03400
Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.958
IX38_03430
3-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.954
IX38_03445
Cell envelope biogenesis protein LolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
IX38_03440
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
IX38_03455
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.908
IX38_03450
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.896
IX38_03425
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.895
IX38_03465
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.877
IX38_03470
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
IX38_03535
Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.849
Your Current Organism:
Chryseobacterium luteum
NCBI taxonomy Id: 421531
Other names: C. luteum, Chryseobacterium luteum Behrendt et al. 2007 emend. Hahnke et al. 2016, Chryseobacterium luteum Behrendt et al. 2007 emend. Montero-Calasanz et al. 2014, DSM 18605, LMG 23785, LMG:23785, strain P 456/04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.