STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX38_06880phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)    
Predicted Functional Partners:
paaB
phenylacetate-CoA oxygenase; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
IX38_06875
phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
IX38_06855
phenylacetate-CoA oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.991
paaA
ATPase AAA; With PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
IX38_21825
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
IX38_06895
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.985
IX38_06850
phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.965
IX38_06885
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.965
IX38_03360
phenylacetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.925
IX38_06920
Phenylacetic acid degradation protein PaaN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.911
Your Current Organism:
Chryseobacterium luteum
NCBI taxonomy Id: 421531
Other names: C. luteum, Chryseobacterium luteum Behrendt et al. 2007 emend. Hahnke et al. 2016, Chryseobacterium luteum Behrendt et al. 2007 emend. Montero-Calasanz et al. 2014, DSM 18605, LMG 23785, LMG:23785, strain P 456/04
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