STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX38_16640Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
IX38_16635
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
IX38_18085
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.681
IX38_03165
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
IX38_06800
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
IX38_16630
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
IX38_15725
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
IX38_14980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
IX38_06995
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
IX38_03125
Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.508
IX38_06530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
Your Current Organism:
Chryseobacterium luteum
NCBI taxonomy Id: 421531
Other names: C. luteum, Chryseobacterium luteum Behrendt et al. 2007 emend. Hahnke et al. 2016, Chryseobacterium luteum Behrendt et al. 2007 emend. Montero-Calasanz et al. 2014, DSM 18605, LMG 23785, LMG:23785, strain P 456/04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.