STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX38_16780Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)    
Predicted Functional Partners:
IX38_16775
Rhs element Vgr protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
IX38_16785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.752
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.605
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.573
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
  
 0.558
IX38_01490
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.510
IX38_03790
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.510
IX38_03925
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.510
IX38_03930
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.510
IX38_02805
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.505
Your Current Organism:
Chryseobacterium luteum
NCBI taxonomy Id: 421531
Other names: C. luteum, Chryseobacterium luteum Behrendt et al. 2007 emend. Hahnke et al. 2016, Chryseobacterium luteum Behrendt et al. 2007 emend. Montero-Calasanz et al. 2014, DSM 18605, LMG 23785, LMG:23785, strain P 456/04
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