STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IX38_20175XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
IX38_20180
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
IX38_20170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.639
IX38_21415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
IX38_06700
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.575
IX38_10410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
IX38_02860
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.473
IX38_12010
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.464
IX38_22710
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
 0.454
IX38_07930
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
IX38_21410
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.447
Your Current Organism:
Chryseobacterium luteum
NCBI taxonomy Id: 421531
Other names: C. luteum, Chryseobacterium luteum Behrendt et al. 2007 emend. Hahnke et al. 2016, Chryseobacterium luteum Behrendt et al. 2007 emend. Montero-Calasanz et al. 2014, DSM 18605, LMG 23785, LMG:23785, strain P 456/04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.