STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLS_LOCUS3847Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (886 aa)    
Predicted Functional Partners:
NLS_LOCUS5654
Uncharacterized protein.
  
 0.999
NLS_LOCUS3461
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.991
NLS_LOCUS2985
Uncharacterized protein.
  
 0.974
NLS_LOCUS1553
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.970
NLS_LOCUS1968
MADF domain-containing protein.
  
0.960
NLS_LOCUS3017
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.955
NLS_LOCUS7935
Uncharacterized protein.
  
 0.955
NLS_LOCUS4529
Lysine--tRNA ligase.
  
 0.943
NLS_LOCUS2650
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.942
NLS_LOCUS4585
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.924
Your Current Organism:
Litomosoides sigmodontis
NCBI taxonomy Id: 42156
Other names: L. sigmodontis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.