STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLS_LOCUS5342Uncharacterized protein. (530 aa)    
Predicted Functional Partners:
NLS_LOCUS9203
Uncharacterized protein.
    
 0.701
NLS_LOCUS9066
SH3 domain-containing protein.
   
 0.685
NLS_LOCUS7618
Uncharacterized protein.
   
 0.685
NLS_LOCUS6479
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.674
NLS_LOCUS1426
Uncharacterized protein.
  
  
0.658
NLS_LOCUS8659
Uncharacterized protein.
   
 0.650
NLS_LOCUS9991
Uncharacterized protein.
   
 0.650
NLS_LOCUS9723
Uncharacterized protein.
   
 0.650
NLS_LOCUS8556
PH domain-containing protein; Belongs to the actin family.
   
 0.635
NLS_LOCUS628
Uncharacterized protein.
   
 
 0.632
Your Current Organism:
Litomosoides sigmodontis
NCBI taxonomy Id: 42156
Other names: L. sigmodontis
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