STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLS_LOCUS6260Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
NLS_LOCUS1252
Uncharacterized protein.
    
 0.821
NLS_LOCUS1836
Uncharacterized protein.
    
 0.821
NLS_LOCUS1250
Uncharacterized protein.
    
 0.821
NLS_LOCUS1253
Uncharacterized protein.
    
 0.821
NLS_LOCUS9641
Uncharacterized protein.
    
 0.673
NLS_LOCUS4898
Uncharacterized protein.
    
 0.653
NLS_LOCUS1318
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.641
NLS_LOCUS1977
Uncharacterized protein.
    
  0.600
NLS_LOCUS5020
Ubiquitin-like domain-containing protein.
    
 0.597
NLS_LOCUS9408
Uncharacterized protein.
    
  0.570
Your Current Organism:
Litomosoides sigmodontis
NCBI taxonomy Id: 42156
Other names: L. sigmodontis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.