STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLS_LOCUS3325Uncharacterized protein. (184 aa)    
Predicted Functional Partners:
NLS_LOCUS852
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.980
NLS_LOCUS508
Uncharacterized protein.
   
 0.900
NLS_LOCUS509
Uncharacterized protein.
   
 0.900
NLS_LOCUS2646
Uncharacterized protein.
   
 0.900
NLS_LOCUS3373
DNA_pol_B_exo1 domain-containing protein.
   
 0.888
NLS_LOCUS3374
DNA polymerase.
   
 0.888
NLS_LOCUS5020
Ubiquitin-like domain-containing protein.
    
  0.880
NLS_LOCUS6640
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.842
NLS_LOCUS6503
Uncharacterized protein.
    
 0.840
NLS_LOCUS5744
Uncharacterized protein.
    
 0.840
Your Current Organism:
Litomosoides sigmodontis
NCBI taxonomy Id: 42156
Other names: L. sigmodontis
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