STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLS_LOCUS8351Uncharacterized protein. (346 aa)    
Predicted Functional Partners:
NLS_LOCUS1252
Uncharacterized protein.
   
 0.906
NLS_LOCUS1836
Uncharacterized protein.
   
 0.906
NLS_LOCUS1250
Uncharacterized protein.
   
 0.906
NLS_LOCUS1253
Uncharacterized protein.
   
 0.906
NLS_LOCUS8331
PDZ domain-containing protein.
   
 0.830
NLS_LOCUS2665
Guanylate kinase-like domain-containing protein.
    
 0.809
NLS_LOCUS2664
Uncharacterized protein.
    
 0.809
NLS_LOCUS3425
Uncharacterized protein.
    
 0.799
NLS_LOCUS8312
DH domain-containing protein.
   
 0.773
NLS_LOCUS2217
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.771
Your Current Organism:
Litomosoides sigmodontis
NCBI taxonomy Id: 42156
Other names: L. sigmodontis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.