STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS55Uncharacterized protein. (484 aa)    
Predicted Functional Partners:
NOO_LOCUS9094
Uncharacterized protein.
     
 0.716
A0A182EHG2
PDZ domain-containing protein.
      
 0.615
NOO_LOCUS5759
YTH domain-containing protein.
    
 
 0.613
NOO_LOCUS1746
Uncharacterized protein.
    
 
 0.515
A0A182ETB5
Uncharacterized protein.
    
 
 0.515
NOO_LOCUS237
Uncharacterized protein.
    
 
 0.471
NOO_LOCUS2715
Structural maintenance of chromosomes protein.
      
 0.455
NOO_LOCUS1745
R3H domain-containing protein.
    
 
 0.445
NOO_LOCUS2788
Tudor domain-containing protein.
    
 
 0.428
NOO_LOCUS7538
Uncharacterized protein.
      
 0.426
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.