STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS245HABP4_PAI-RBP1 domain-containing protein. (437 aa)    
Predicted Functional Partners:
NOO_LOCUS4102
WD_REPEATS_REGION domain-containing protein.
   
 
 0.995
NOO_LOCUS4933
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.991
NOO_LOCUS3034
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.987
NOO_LOCUS3153
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.986
NOO_LOCUS6074
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.984
NOO_LOCUS3496
Uncharacterized protein.
   
 
 0.983
NOO_LOCUS3908
Ribosomal_S10 domain-containing protein.
   
 
 0.979
NOO_LOCUS1398
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.978
NOO_LOCUS9787
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 
 0.977
NOO_LOCUS580
Ribosomal_L18A domain-containing protein.
   
 
 0.976
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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