STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS255Uncharacterized protein. (605 aa)    
Predicted Functional Partners:
A0A182E203
Uncharacterized protein.
   
 
 0.980
NOO_LOCUS2520
Sas10 domain-containing protein.
   
   0.971
NOO_LOCUS2806
Nop domain-containing protein.
   
   0.966
NOO_LOCUS3416
Uncharacterized protein.
   
 
 0.962
NOO_LOCUS5637
Nucleolar protein 6.
   
 
 0.960
NOO_LOCUS3830
Brix domain-containing protein.
   
    0.954
NOO_LOCUS5533
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
    0.953
NOO_LOCUS783
Uncharacterized protein.
   
 
 0.943
NOO_LOCUS1252
PUM-HD domain-containing protein.
   
  
 0.933
NOO_LOCUS4275
Brix domain-containing protein.
   
    0.932
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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