STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS381Uncharacterized protein. (117 aa)    
Predicted Functional Partners:
NOO_LOCUS6159
PAS domain-containing protein.
    
 0.987
A0A182EAA8
Uncharacterized protein.
    
 0.940
NOO_LOCUS8274
Uncharacterized protein.
    
 0.940
A0A182E203
Uncharacterized protein.
    
 0.937
NOO_LOCUS2222
RIO domain-containing protein.
    
 0.931
NOO_LOCUS6955
Uncharacterized protein.
   
 0.886
NOO_LOCUS5313
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.875
NOO_LOCUS2366
ATP-dependent DNA helicase; Belongs to the helicase family.
    
 0.854
NOO_LOCUS2368
Bms1-type G domain-containing protein.
    
 0.854
NOO_LOCUS3034
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.854
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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