STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS1165VWFA domain-containing protein. (67 aa)    
Predicted Functional Partners:
NOO_LOCUS1471
Uncharacterized protein.
    
 0.956
NOO_LOCUS2582
DUF3677 domain-containing protein.
    
 0.956
NOO_LOCUS6221
Uncharacterized protein.
    
 0.954
NOO_LOCUS1098
Uncharacterized protein.
    
 0.953
NOO_LOCUS5210
Uncharacterized protein.
    
 0.953
NOO_LOCUS1936
PHD-type domain-containing protein.
    
 0.949
NOO_LOCUS6565
Uncharacterized protein.
    
  0.897
NOO_LOCUS7395
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.897
NOO_LOCUS7458
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.897
NOO_LOCUS8666
Uncharacterized protein.
   
 0.895
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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