STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS1588GRIP domain-containing protein. (714 aa)    
Predicted Functional Partners:
NOO_LOCUS2337
Uncharacterized protein.
   
 0.992
NOO_LOCUS5250
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.991
NOO_LOCUS1813
Nuclear pore protein.
   
 0.990
NOO_LOCUS145
Small ubiquitin-related modifier.
    
 0.988
NOO_LOCUS3011
Uncharacterized protein.
   
 0.988
NOO_LOCUS4302
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.986
NOO_LOCUS2392
Nucleoporin_C domain-containing protein.
   
 0.985
NOO_LOCUS3067
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.985
NOO_LOCUS2056
Uncharacterized protein.
   
 0.977
NOO_LOCUS8217
Helicase ATP-binding domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.977
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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