STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS1954RING-type domain-containing protein. (310 aa)    
Predicted Functional Partners:
NOO_LOCUS4639
Uncharacterized protein.
   
 0.975
NOO_LOCUS4065
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.899
NOO_LOCUS4826
Uncharacterized protein.
    
 0.899
NOO_LOCUS3250
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.878
NOO_LOCUS8404
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.878
NOO_LOCUS7305
Uncharacterized protein.
    
 0.825
NOO_LOCUS8284
PRKCSH domain-containing protein.
    
 0.825
NOO_LOCUS8687
Uncharacterized protein.
    
 0.825
NOO_LOCUS9001
PRKCSH domain-containing protein.
    
 0.825
NOO_LOCUS12167
Ubiquitin-like domain-containing protein.
    
 0.811
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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