NOO_LOCUS5242 protein (Onchocerca ochengi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NOO_LOCUS5242

Methyltransf_11 domain-containing protein. (232 aa)

Predicted Functional Partners:

NOO_LOCUS3831

0.993

NOO_LOCUS3167

0.968

NOO_LOCUS7515

0.957

A0A182ER26

0.939

NOO_LOCUS4486

0.934

NOO_LOCUS6559

0.932

NOO_LOCUS4710

0.922

NOO_LOCUS4380

0.919

NOO_LOCUS5141

0.898

NOO_LOCUS7840

0.888

Your Current Organism:

Onchocerca ochengi

NCBI taxonomy Id: 42157
Other names: O. ochengi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A182ER26	NOO_LOCUS3167	A0A182ER26	A0A182E590	Uncharacterized protein.	Uncharacterized protein.	0.825
A0A182ER26	NOO_LOCUS3831	A0A182ER26	A0A182E740	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.999
A0A182ER26	NOO_LOCUS4380	A0A182ER26	A0A182E8M4	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A182ER26	NOO_LOCUS4486	A0A182ER26	A0A182E8Y0	Uncharacterized protein.	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).	0.851
A0A182ER26	NOO_LOCUS4710	A0A182ER26	A0A182E9J9	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A182ER26	NOO_LOCUS5141	A0A182ER26	A0A182EAR3	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.999
A0A182ER26	NOO_LOCUS5242	A0A182ER26	A0A182EB12	Uncharacterized protein.	Methyltransf_11 domain-containing protein.	0.939
A0A182ER26	NOO_LOCUS6559	A0A182ER26	A0A182EEQ1	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.999
A0A182ER26	NOO_LOCUS7515	A0A182ER26	A0A182EHE1	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 30 kDa subunit family.	0.993
A0A182ER26	NOO_LOCUS7840	A0A182ER26	A0A182EIB1	Uncharacterized protein.	Uncharacterized protein.	0.999
NOO_LOCUS3167	A0A182ER26	A0A182E590	A0A182ER26	Uncharacterized protein.	Uncharacterized protein.	0.825
NOO_LOCUS3167	NOO_LOCUS3831	A0A182E590	A0A182E740	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.876
NOO_LOCUS3167	NOO_LOCUS4380	A0A182E590	A0A182E8M4	Uncharacterized protein.	Uncharacterized protein.	0.879
NOO_LOCUS3167	NOO_LOCUS4486	A0A182E590	A0A182E8Y0	Uncharacterized protein.	Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).	0.906
NOO_LOCUS3167	NOO_LOCUS4710	A0A182E590	A0A182E9J9	Uncharacterized protein.	Uncharacterized protein.	0.883
NOO_LOCUS3167	NOO_LOCUS5141	A0A182E590	A0A182EAR3	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.878
NOO_LOCUS3167	NOO_LOCUS5242	A0A182E590	A0A182EB12	Uncharacterized protein.	Methyltransf_11 domain-containing protein.	0.968
NOO_LOCUS3167	NOO_LOCUS6559	A0A182E590	A0A182EEQ1	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.932
NOO_LOCUS3167	NOO_LOCUS7515	A0A182E590	A0A182EHE1	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I 30 kDa subunit family.	0.736
NOO_LOCUS3167	NOO_LOCUS7840	A0A182E590	A0A182EIB1	Uncharacterized protein.	Uncharacterized protein.	0.813