STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS5274Uncharacterized protein. (643 aa)    
Predicted Functional Partners:
NOO_LOCUS5571
Uncharacterized protein.
   
 0.992
NOO_LOCUS3213
Uncharacterized protein.
    
 0.991
NOO_LOCUS4289
SH3 domain-containing protein.
   
 0.990
NOO_LOCUS2339
Uncharacterized protein.
    
 0.981
NOO_LOCUS3921
WH2 domain-containing protein.
    
 0.981
NOO_LOCUS839
Uncharacterized protein.
    
 0.951
NOO_LOCUS8723
Uncharacterized protein.
 
     0.945
NOO_LOCUS4797
Uncharacterized protein.
    
 0.872
NOO_LOCUS2704
Uncharacterized protein.
    
 0.869
NOO_LOCUS820
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.864
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.