STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS5325Cnd3 domain-containing protein. (966 aa)    
Predicted Functional Partners:
NOO_LOCUS4371
Structural maintenance of chromosomes protein.
   
 0.998
NOO_LOCUS4036
Uncharacterized protein.
   
 0.996
NOO_LOCUS4665
SMC_N domain-containing protein.
   
 0.991
NOO_LOCUS5128
SMC hinge domain-containing protein.
   
 0.991
NOO_LOCUS5127
Uncharacterized protein.
   
 0.988
NOO_LOCUS2715
Structural maintenance of chromosomes protein.
   
 0.952
NOO_LOCUS1687
Structural maintenance of chromosomes protein.
   
 0.947
NOO_LOCUS4296
SMC_N domain-containing protein.
   
 0.939
A0A182ER29
Uncharacterized protein.
   
 0.920
A0A182ETA9
Uncharacterized protein.
   
 0.920
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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