STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS5405DUF384 domain-containing protein. (116 aa)    
Predicted Functional Partners:
NOO_LOCUS9026
Uncharacterized protein.
   
 
 0.939
NOO_LOCUS9726
Uncharacterized protein.
   
 
 0.939
NOO_LOCUS219
Utp12 domain-containing protein.
   
   0.823
NOO_LOCUS7929
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
    0.771
NOO_LOCUS4275
Brix domain-containing protein.
   
    0.749
NOO_LOCUS4241
Uncharacterized protein.
   
   0.695
NOO_LOCUS8035
WD_REPEATS_REGION domain-containing protein.
   
    0.689
NOO_LOCUS6908
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.683
NOO_LOCUS7626
Uncharacterized protein.
   
    0.670
NOO_LOCUS10468
TRASH domain-containing protein.
   
    0.657
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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