STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS5406Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
NOO_LOCUS989
BHLH domain-containing protein.
    
 0.769
NOO_LOCUS1042
BHLH domain-containing protein.
    
 0.769
NOO_LOCUS2885
RanBP2-type domain-containing protein.
    
 0.748
NOO_LOCUS5362
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.738
NOO_LOCUS8596
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.738
NOO_LOCUS9037
Runt domain-containing protein.
   
 0.716
NOO_LOCUS6070
Uncharacterized protein.
   
  0.706
NOO_LOCUS6264
RING-type domain-containing protein.
    
 0.704
NOO_LOCUS3631
E2F_TDP domain-containing protein.
    
  0.699
NOO_LOCUS7790
E2F_TDP domain-containing protein.
    
  0.699
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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