STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS5552Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (483 aa)    
Predicted Functional Partners:
NOO_LOCUS4131
Phosphodiesterase delta-like protein; Belongs to the PDE6D/unc-119 family.
    
 0.987
NOO_LOCUS5911
GMP_PDE_delta domain-containing protein.
    
 
 0.966
NOO_LOCUS927
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
0.816
NOO_LOCUS12622
C-CAP/cofactor C-like domain-containing protein.
    
 
 0.751
NOO_LOCUS2856
CAP-Gly domain-containing protein.
    
 
 0.734
NOO_LOCUS536
Uncharacterized protein.
     
 0.727
NOO_LOCUS499
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
0.666
NOO_LOCUS1118
Uncharacterized protein.
   
 0.650
NOO_LOCUS4744
Uncharacterized protein.
   
 0.650
NOO_LOCUS4860
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 
 0.650
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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