STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS3176Uncharacterized protein. (70 aa)    
Predicted Functional Partners:
NOO_LOCUS4634
SRP54 domain-containing protein.
   
 0.983
NOO_LOCUS10200
SRP-alpha_N domain-containing protein.
   
 0.983
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
 
 0.964
NOO_LOCUS4083
Uncharacterized protein.
   
 
 0.960
NOO_LOCUS5053
Uncharacterized protein.
   
 
 0.955
NOO_LOCUS13574
Uncharacterized protein.
  
 
 0.929
NOO_LOCUS3107
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
   0.921
NOO_LOCUS4170
Signal recognition particle 9 kDa protein; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. SRP9 together with SRP14 and the Alu portion of the SRP RNA, constitutes the elongation arrest domain of SRP. The complex of SRP9 and SRP14 is required for SRP RNA binding.
   
 
 0.911
NOO_LOCUS2428
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.901
NOO_LOCUS9890
Uncharacterized protein.
   
 
 0.887
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.