STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS5624Uncharacterized protein. (766 aa)    
Predicted Functional Partners:
NOO_LOCUS12167
Ubiquitin-like domain-containing protein.
   
 
 0.931
NOO_LOCUS2245
UBA domain-containing protein.
   
 
 0.794
NOO_LOCUS5221
Uncharacterized protein.
   
 
 0.794
NOO_LOCUS10328
Ubiquitin-like domain-containing protein.
   
   0.707
NOO_LOCUS4965
Uncharacterized protein.
    
 
 0.684
NOO_LOCUS7164
Rab-GAP TBC domain-containing protein.
    
 
 0.684
NOO_LOCUS7939
Uncharacterized protein.
    
 
 0.684
NOO_LOCUS3315
Uncharacterized protein.
   
 
 0.666
NOO_LOCUS4154
VWFA domain-containing protein.
   
 
 0.666
NOO_LOCUS5178
Uncharacterized protein.
   
 
 0.661
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.