STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS7776Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
NOO_LOCUS4933
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
NOO_LOCUS1441
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.998
NOO_LOCUS1849
Uncharacterized protein.
  
 0.998
NOO_LOCUS4745
Uncharacterized protein.
  
 0.998
NOO_LOCUS4769
Ribosomal_L18e/L15P domain-containing protein.
  
 0.998
NOO_LOCUS5421
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 0.998
NOO_LOCUS10602
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
NOO_LOCUS580
Ribosomal_L18A domain-containing protein.
   
 0.997
NOO_LOCUS730
Ribosomal_L7Ae domain-containing protein.
  
 0.997
NOO_LOCUS1351
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.997
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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