STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOO_LOCUS11142Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
NOO_LOCUS7059
Uncharacterized protein.
    
 0.722
NOO_LOCUS9209
dUTPase domain-containing protein.
    
 0.715
NOO_LOCUS1617
DIRP domain-containing protein.
    
 0.687
NOO_LOCUS1343
WD_REPEATS_REGION domain-containing protein.
    
 0.671
NOO_LOCUS6373
Uncharacterized protein.
    
 0.670
NOO_LOCUS7920
CRC domain-containing protein.
    
 0.667
NOO_LOCUS6443
ERCC4 domain-containing protein.
    
  0.635
NOO_LOCUS1163
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
   
 0.619
NOO_LOCUS4974
Uncharacterized protein.
   
  0.610
NOO_LOCUS6678
Uncharacterized protein.
   
  0.610
Your Current Organism:
Onchocerca ochengi
NCBI taxonomy Id: 42157
Other names: O. ochengi
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