STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KON68412.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (89 aa)    
Predicted Functional Partners:
sigG
Sporulation sigma factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.882
sigE
Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.855
KON66871.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.803
SpoVAC
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.793
SpoVAC-2
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.793
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
     0.779
SpoIIGA
Peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
 
   
 0.774
KON68540.1
Translocation-enhancing protein TepA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
SpoIIIAA
Stage III sporulation protein AA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.773
spoIVB
Peptidase S55; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.770
Your Current Organism:
Bacillus butanolivorans
NCBI taxonomy Id: 421767
Other names: B. butanolivorans, Bacillus butanolivorans Kuisiene et al. 2008, DSM 18926, LMG 23974, LMG:23974, strain K9
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