STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429865_00438Unannotated protein. (426 aa)    
Predicted Functional Partners:
GCA_000429865_02801
Unannotated protein.
   
 0.970
GCA_000429865_02267
Unannotated protein.
   
 
 0.939
GCA_000429865_03273
Unannotated protein.
   
 
 0.939
GCA_000429865_00437
Unannotated protein.
       0.839
GCA_000429865_00436
Unannotated protein.
       0.813
GCA_000429865_02523
Unannotated protein.
  
    0.813
GCA_000429865_00446
Unannotated protein.
 
 
 0.797
GCA_000429865_02305
Unannotated protein.
 
 
 0.792
GCA_000429865_00452
Unannotated protein.
  
  
 0.791
GCA_000429865_01401
Unannotated protein.
  
 0.777
Your Current Organism:
Cucumibacter marinus
NCBI taxonomy Id: 422296
Other names: C. marinus DSM 18995, Cucumibacter marinus CL-GR60, Cucumibacter marinus DSM 18995, Rhizobiales bacterium CL-GR60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.