STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429865_00673Unannotated protein. (239 aa)    
Predicted Functional Partners:
GCA_000429865_00100
Unannotated protein.
  
 
 0.951
GCA_000429865_02615
Unannotated protein.
    
   0.912
GCA_000429865_02799
Unannotated protein.
  
 
 0.535
GCA_000429865_00672
Unannotated protein.
       0.529
GCA_000429865_01781
Unannotated protein.
  
 
 0.505
GCA_000429865_00939
Unannotated protein.
  
 
 0.502
GCA_000429865_01704
Unannotated protein.
  
 
 0.502
GCA_000429865_02965
Unannotated protein.
  
    0.472
GCA_000429865_00702
Unannotated protein.
   
 
  0.471
GCA_000429865_00028
Unannotated protein.
  
 0.453
Your Current Organism:
Cucumibacter marinus
NCBI taxonomy Id: 422296
Other names: C. marinus DSM 18995, Cucumibacter marinus CL-GR60, Cucumibacter marinus DSM 18995, Rhizobiales bacterium CL-GR60
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.