STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429865_00706Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000429865_00705
Unannotated protein.
 
 
  0.990
GCA_000429865_00704
Unannotated protein.
 
 
  0.923
GCA_000429865_00830
Unannotated protein.
  
  
  0.666
GCA_000429865_00828
Unannotated protein.
  
  
  0.636
GCA_000429865_03386
Unannotated protein.
 
 
  0.563
GCA_000429865_03354
Unannotated protein.
 
 
  0.550
GCA_000429865_00983
Unannotated protein.
  
  
  0.544
GCA_000429865_00707
Unannotated protein.
       0.541
GCA_000429865_03474
Unannotated protein.
 
 
  0.540
GCA_000429865_01246
Unannotated protein.
  
  
  0.536
Your Current Organism:
Cucumibacter marinus
NCBI taxonomy Id: 422296
Other names: C. marinus DSM 18995, Cucumibacter marinus CL-GR60, Cucumibacter marinus DSM 18995, Rhizobiales bacterium CL-GR60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.