STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429865_02428Unannotated protein. (316 aa)    
Predicted Functional Partners:
GCA_000429865_02783
Unannotated protein.
  
 0.995
GCA_000429865_02062
Unannotated protein.
   
 0.989
GCA_000429865_03404
Unannotated protein.
   
 0.944
GCA_000429865_02837
Unannotated protein.
   
 0.915
GCA_000429865_00118
Unannotated protein.
   
 
 0.856
GCA_000429865_02877
Unannotated protein.
   
 0.854
GCA_000429865_01023
Unannotated protein.
  
 
 0.845
GCA_000429865_00774
Unannotated protein.
   
 0.840
GCA_000429865_01662
Unannotated protein.
    
 0.835
GCA_000429865_00420
Unannotated protein.
    
 0.832
Your Current Organism:
Cucumibacter marinus
NCBI taxonomy Id: 422296
Other names: C. marinus DSM 18995, Cucumibacter marinus CL-GR60, Cucumibacter marinus DSM 18995, Rhizobiales bacterium CL-GR60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.